Here is a list of all functions with links to the classes they belong to:
- c -
- c() : pwiz::proteome::Fragmentation
- c_str() : pwiz::minimxml::SAXParser::saxstring
- cache() : pwiz::proteome::ProteinListCache
- CacheEntry() : pwiz::msdata::SpectrumListCache::CacheEntry
- calcCorrelation() : pwiz::analysis::CwtPeakDetector
- calculateMetadata() : pwiz::data::peakdata::Feature, pwiz::data::peakdata::Peakel
- calculateNoise() : pwiz::analysis::NoiseCalculator, pwiz::analysis::NoiseCalculator_2Pass
- CalibrationParameters() : pwiz::data::CalibrationParameters
- calibrationParameters() : pwiz::data::FrequencyData
- CancelListener() : CancelListener
- CancelProgressCallback() : CancelProgressCallback
- canConvertIonMobilityAndCCS() : pwiz::analysis::SpectrumList_IonMobility, pwiz::msdata::detail::SpectrumList_Agilent, pwiz::msdata::detail::SpectrumList_Bruker, pwiz::msdata::detail::SpectrumList_Thermo, pwiz::msdata::detail::SpectrumList_Waters, pwiz::msdata::SpectrumListIonMobilityBase
- capacity() : pwiz::minimxml::SAXParser::saxstring, pwiz::util::BinaryData< T >
- cbegin() : pwiz::util::BinaryData< T >
- ccsToIonMobility() : pwiz::analysis::SpectrumList_IonMobility, pwiz::msdata::detail::SpectrumList_Agilent, pwiz::msdata::detail::SpectrumList_Bruker, pwiz::msdata::detail::SpectrumList_Thermo, pwiz::msdata::detail::SpectrumList_Waters, pwiz::msdata::SpectrumListIonMobilityBase
- cend() : pwiz::util::BinaryData< T >
- center() : pwiz::frequency::MagnitudeLorentzian, pwiz::math::Parabola
- characters() : FifthHandler, FirstHandler, PrintEventHandler, pwiz::data::peakdata::HandlerPeak, pwiz::minimxml::basic_charcounter< Ch >, pwiz::minimxml::SAXParser::Handler, pwiz::minimxml::XMLWriter, SecondHandler
- CharIndexedVector() : pwiz::util::CharIndexedVector< T >
- CharIndexedVectorConstIterator() : pwiz::util::CharIndexedVectorConstIterator< T >
- CharIndexedVectorIterator() : pwiz::util::CharIndexedVectorIterator< T >
- checkDelimiter() : pwiz::analysis::TabularConfig
- CheckForError() : pwiz::analysis::CubicHermiteSpline
- child() : pwiz::identdata::TextWriter, pwiz::msdata::TextWriter, pwiz::proteome::TextWriter, pwiz::tradata::TextWriter
- chromatogram() : MyBase, pwiz::analysis::ChromatogramList_Filter, pwiz::analysis::ChromatogramList_LockmassRefiner, pwiz::analysis::ChromatogramList_SavitzkyGolaySmoother, pwiz::analysis::ChromatogramListWrapper
- Chromatogram() : pwiz::msdata::Chromatogram
- chromatogram() : pwiz::msdata::ChromatogramList, pwiz::msdata::ChromatogramListSimple, pwiz::msdata::detail::ChromatogramList_ABI, pwiz::msdata::detail::ChromatogramList_Agilent, pwiz::msdata::detail::ChromatogramList_Bruker, pwiz::msdata::detail::ChromatogramList_Shimadzu, pwiz::msdata::detail::ChromatogramList_Thermo, pwiz::msdata::detail::ChromatogramList_Waters
- chromatogramCount() : pwiz::msdata::Index_mzML
- chromatogramIdentity() : MyBase, pwiz::analysis::ChromatogramList_Filter, pwiz::analysis::ChromatogramListWrapper
- ChromatogramIdentity() : pwiz::msdata::ChromatogramIdentity
- chromatogramIdentity() : pwiz::msdata::ChromatogramList, pwiz::msdata::ChromatogramListSimple, pwiz::msdata::detail::ChromatogramList_ABI, pwiz::msdata::detail::ChromatogramList_Agilent, pwiz::msdata::detail::ChromatogramList_Bruker, pwiz::msdata::detail::ChromatogramList_Shimadzu, pwiz::msdata::detail::ChromatogramList_Thermo, pwiz::msdata::detail::ChromatogramList_Waters, pwiz::msdata::Index_mzML
- ChromatogramList_Filter() : pwiz::analysis::ChromatogramList_Filter
- ChromatogramList_FilterPredicate_IndexSet() : pwiz::analysis::ChromatogramList_FilterPredicate_IndexSet
- ChromatogramList_LockmassRefiner() : pwiz::analysis::ChromatogramList_LockmassRefiner
- ChromatogramList_SavitzkyGolaySmoother() : pwiz::analysis::ChromatogramList_SavitzkyGolaySmoother
- ChromatogramList_XICGenerator() : pwiz::analysis::ChromatogramList_XICGenerator
- ChromatogramListWrapper() : pwiz::analysis::ChromatogramListWrapper
- circle() : pwiz::util::Image
- clear() : pwiz::data::ParamContainer, pwiz::identdata::Pep2MzIdent, pwiz::minimxml::SAXParser::saxstring, pwiz::proteome::ModificationMap, pwiz::util::BinaryData< T >, pwiz::util::CharIndexedVector< T >, pwiz::util::mru_list< Item, KeyExtractor >, pwiz::util::shared_map< keyT, valueT, _Pr, _Alloc >, pwiz::util::virtual_map< keyT, valueT, _Pr, _Alloc >
- clearBinaryData() : pwiz::msdata::SpectrumInfo
- clip() : pwiz::util::Image
- close() : pwiz::analysis::MSDataAnalyzer, pwiz::analysis::MSDataAnalyzerContainer, pwiz::analysis::PepxmlRecordReader, pwiz::analysis::RegionAnalyzer, pwiz::analysis::RegionSIC, pwiz::analysis::RegionSlice, pwiz::analysis::RegionTIC, pwiz::analysis::RunSummary, pwiz::analysis::SpectrumTable, pwiz::util::DefaultTabHandler, pwiz::util::random_access_compressed_ifstream, pwiz::util::SHA1Calculator, pwiz::util::SHA1SymmetricFilter, pwiz::util::TabHandler, SimpleAnalyzer
- coefficients() : pwiz::frequency::MagnitudeLorentzian, pwiz::math::Parabola
- Color() : pwiz::util::Image::Color
- columns() : pwiz::util::DefaultTabHandler
- Component() : pwiz::msdata::Component
- Compound() : pwiz::tradata::Compound
- Config() : pwiz::analysis::FeatureDetectorPeakel::Config, pwiz::analysis::MS2Deisotoper::Config, pwiz::analysis::MS2NoiseFilter::Config, pwiz::analysis::MSDataCache::Config, pwiz::analysis::NoiseCalculator_2Pass::Config, pwiz::analysis::PeakelGrower_Proximity::Config, pwiz::analysis::PeakelPicker_Basic::Config, pwiz::analysis::PeakFamilyDetectorFT::Config, pwiz::analysis::PeakFinder_SNR::Config, pwiz::analysis::PeakFitter_Parabola::Config, pwiz::analysis::PepxmlRecordReader::Config, pwiz::analysis::PrecursorMassFilter::Config, pwiz::analysis::PrecursorRecalculatorDefault::Config, pwiz::analysis::RegionAnalyzer::Config, pwiz::analysis::RegionSIC::Config, pwiz::analysis::RegionSlice::Config, pwiz::analysis::RegionTIC::Config, pwiz::analysis::RunSummary::Config, pwiz::analysis::SpectrumBinaryData::Config, pwiz::analysis::SpectrumTable::Config, pwiz::chemistry::IsotopeEnvelopeEstimator::Config, pwiz::frequency::FrequencyEstimatorPhysicalModel::Config
- config() : pwiz::frequency::PeakDetectorMatchedFilter
- Config() : pwiz::frequency::PeakDetectorMatchedFilter::Config, pwiz::identdata::Reader::Config, pwiz::identdata::Serializer_mzIdentML::Config, pwiz::identdata::Serializer_pepXML::Config, pwiz::identdata::Serializer_protXML::Config, pwiz::identdata::Serializer_Text::Config, pwiz::minimxml::XMLWriter::Config, pwiz::msdata::BinaryDataEncoder::Config, pwiz::msdata::Reader::Config, pwiz::msdata::Serializer_mzML::Config, pwiz::msdata::Serializer_mzXML::Config, pwiz::msdata::SpectrumIterator::Config, pwiz::proteome::Digestion::Config, pwiz::proteome::Reader_FASTA::Config, pwiz::proteome::Serializer_FASTA::Config, Reader1::Config, Reader2::Config
- const_iterator() : pwiz::proteome::Digestion::const_iterator, pwiz::util::BinaryData< T >::const_iterator
- Contact() : pwiz::identdata::Contact, pwiz::tradata::Contact
- ContactRole() : pwiz::identdata::ContactRole
- Contains() : pwiz::analysis::DemuxWindow
- contains() : pwiz::util::IntegerSet, pwiz::util::IntegerSet::Interval
- ContainsCenter() : pwiz::analysis::DemuxWindow
- Convert2Dense() : ralab::base::resample::Convert2Dense
- convert2dense() : ralab::base::resample::Convert2Dense
- copyDelimiterConfig() : pwiz::analysis::TabularConfig
- Correlation() : pwiz::math::MatchedFilter::Correlation< Y >
- count() : pwiz::util::shared_map< keyT, valueT, _Pr, _Alloc >, pwiz::util::virtual_map< keyT, valueT, _Pr, _Alloc >, TestListener
- countFiltersApplied() : pwiz::msdata::MSData
- covariance() : pwiz::math::Stats
- crbegin() : pwiz::util::BinaryData< T >
- create() : pwiz::analysis::FeatureDetectorPeakel, pwiz::data::BinaryIndexStream, pwiz::data::Index, pwiz::data::MemoryIndex, pwiz::frequency::FrequencyEstimatorPhysicalModel, pwiz::frequency::FrequencyEstimatorSimple, pwiz::frequency::ParameterEstimator, pwiz::frequency::PeakDetectorMatchedFilter, pwiz::frequency::PeakDetectorNaive, pwiz::frequency::TruncatedLorentzianEstimator, pwiz::msdata::ChromatogramList_mzML, pwiz::msdata::SpectrumList_BTDX, pwiz::msdata::SpectrumList_MGF, pwiz::msdata::SpectrumList_MSn, pwiz::msdata::SpectrumList_mzML, pwiz::msdata::SpectrumList_mzXML, pwiz::util::Image
- createMap() : pwiz::identdata::CVMap
- crend() : pwiz::util::BinaryData< T >
- CSHA1() : CSHA1
- CTerminus() : pwiz::proteome::ModificationMap
- CTerminusIsSpecific() : pwiz::proteome::DigestedPeptide
- CTerminusSuffix() : pwiz::proteome::DigestedPeptide
- CubicHermiteSpline() : pwiz::analysis::CubicHermiteSpline
- CubicInterpolate() : ralab::base::base::utilities::CubicInterpolate< TReal >
- CubicSplineDummyInitialize() : CubicHermiteSplineTest
- CustomPair() : CustomPair
- cutoffNoiseFloor() : pwiz::data::FrequencyData
- CVIDMatchCVMap() : pwiz::identdata::CVIDMatchCVMap
- CVMap() : pwiz::identdata::CVMap
- CVParam() : pwiz::data::CVParam
- cvParam() : pwiz::data::ParamContainer
- cvParamChild() : pwiz::data::ParamContainer
- cvParamChildren() : pwiz::data::ParamContainer
- cvParamChildValueOrDefault() : pwiz::data::ParamContainer
- CVParamIs() : pwiz::data::CVParamIs
- CVParamIsChildOf() : pwiz::data::CVParamIsChildOf
- cvParamValueOrDefault() : pwiz::data::ParamContainer
- CVTermInfo() : pwiz::cv::CVTermInfo
- CVTranslator() : pwiz::data::CVTranslator
- CwtPeakDetector() : pwiz::analysis::CwtPeakDetector